BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023F05SP1|AL428087
(1102 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1512 2106 0.0
>3x_Contig1512
Length = 8803
Score = 2106 bits (1060), Expect = 0.0
Identities = 1098/1106 (99%), Gaps = 5/1106 (0%)
Strand = Plus / Plus
Query: 1 atctttacacattcgttagcatcgtccaacgccttcacaaaatccttattagaagcgtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1175 atctttacacattcgttagcatcgtccaacgccttcacaaaatccttattagaagcgtaa 1234
Query: 61 catgcagaacggttagagaacaaaacatggtttggctgttctgaaacttcaatagcctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1235 catgcagaacggttagagaacaaaacatggtttggctgttctgaaacttcaatagcctta 1294
Query: 121 gtaaacaattcaattgccttggcataatccttggaggcaaatgcctggttaccttcttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1295 gtaaacaattcaattgccttggcataatccttggaggcaaatgcctggttaccttcttgt 1354
Query: 181 ttgaattgatcagcactcatctcgtttgtaaaatccctagatttttttctttgtttcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1355 ttgaattgatcagcactcatctcgtttgtaaaatccctagatttttttctttgtttcttg 1414
Query: 241 acgctagtaccaataagacgaaacgaataacactgtttcagttagacaattagcaactgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1415 acgctagtaccaataagacgaaacgaataacactgtttcagttagacaattagcaactgt 1474
Query: 301 tcctaggttgatattcgacgcgttatctgaacttattggcccaaattcaccattcgatct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1475 tcctaggttgatattcgacgcgttatctgaacttattggcccaaattcaccattcgatct 1534
Query: 361 tatcaaaactccctctttttatattagttggatgtcaattgttcaaagattgttagggca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1535 tatcaaaactccctctttttatattagttggatgtcaattgttcaaagattgttagggca 1594
Query: 421 gagcagtattttttttcgagaacgttcttgacatgatgttacccggatctcgtgataaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1595 gagcagtattttttttcgagaacgttcttgacatgatgttacccggatctcgtgataaca 1654
Query: 481 cacatgttgtataacccaaaaacagaggcctgacatatccatataacgagaaattctgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1655 cacatgttgtataacccaaaaacagaggcctgacatatccatataacgagaaattctgtg 1714
Query: 541 ctcattactcattgcttctcgtttcaattattgactaccgtatgaatttcaatttagcgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1715 ctcattactcattgcttctcgtttcaattattgactaccgtatgaatttcaatttagcgc 1774
Query: 601 tgaacattaaccctggtagtatccttttcaccacatttttgtttgtttcctatctatatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1775 tgaacattaaccctggtagtatccttttcaccacatttttgtttgtttcctatctatatt 1834
Query: 661 ttgtcattattattctgacattgatgaaaatttaatatgttcctaatctggaggttagct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1835 ttgtcattattattctgacattgatgaaaatttaatatgttcctaatctggaggttagct 1894
Query: 721 catcgcgaacaaagattagtgatttaagaaggaccttaaggcctatatctgaacatttct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1895 catcgcgaacaaagattagtgatttaagaaggaccttaaggcctatatctgaacatttct 1954
Query: 781 taggcgttattaagcgggatttggaaatatgactgctactgattttgaaagaaaaactga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1955 taggcgttattaagcgggatttggaaatatgactgctactgattttgaaagaaaaactga 2014
Query: 841 tttgtttttagagtggttacccacagttggaatcaaattgtctaagaatgtcaaaattgt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2015 tttgtttttagagtggttacccacagttggaatcaaattgtctaagaatgtcaaaattgt 2074
Query: 901 cgattcgagagatgagcatcaaggtagatctatgatctgcattaacgacgtgaaggaggg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2075 cgattcgagagatgagcatcaaggtagatctatgatctgcattaacgacgtgaaggaggg 2134
Query: 961 agagaagctgttttcggtacctgagacagcttcattgaatattatcaccggttcytttgg 1020
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2135 agagaagctgttttcggtacctgagacagcttcattgaatattatcaccggttc-tttgg 2193
Query: 1021 gtaaactggatgaaa-cyattwaggaa-tttgctgagtaaggttg-acattggcatggkt 1077
||||||||||||||| | ||| ||||| ||||||||||||||||| |||||||||||| |
Sbjct: 2194 gtaaactggatgaaagctatttaggaattttgctgagtaaggttgaacattggcatggtt 2253
Query: 1078 tgattttaacca-cttatacgagtgg 1102
|||||||||||| |||||||||||||
Sbjct: 2254 tgattttaaccatcttatacgagtgg 2279
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9344
Number of Sequences: 1807
Number of extensions: 9344
Number of successful extensions: 68
Number of sequences better than 1.0e-20: 1
length of query: 1102
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1086
effective length of database: 10,329,639
effective search space: 11217987954
effective search space used: 11217987954
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)